Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIYLDNAATTPMSAVAISAMTKVMQETHGNPSSIHGHGRQAGKLLREARQELAQLLRTKPQHIFFTSGGTEANNTTI--IGYCLRHQE--QGK---HIITTAIEHHAVLETIDYLVQHFGFEATIIQPE--NQEITAQQIQKALRDDTILVSTMFANNETGNLLPIAEIGQILK---QHPAA-------YHVDAVQAIGKIPIHSEELGIDFLTASAHKFHGPKGIGFLYASSM----DFDSYLHGGDQEQKKRAGTENLPAIVGMVAA---LKENLEKQEEHFQHVQN-LETAFLAELEGIQYYLNR---GKHHLPYVLNIGFPGQKNDLLLLRLDLAGISISTGSACTAGVVQSSHVLEAMYGANSERLKESLRISLSPQNTVEDLQTLAKTLKEIIGG
3A9X Chain:B ((20-425))-VYMDYNATTPLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGGKPQDIIFTSGGTESNNLVIHSTVRCFHEQQTLQ--TRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKVNGQVEVEDILAAVRPTTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQALGKRRVDVEDLGVDFLTIVGHKFYGPR-IGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVSENCETYEAHMRDIRDYLEERLEAEF-GKRIHLNSRFPGVERLPNTCNFSIQGSQLRGYMVLAQCQTLLASVGASCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAV--


General information:
TITO was launched using:
RESULT:

Template: 3A9X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 2014 -8942 -4.44 -24.56
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain B : 0.77

3D Compatibility (PKB) : -4.44
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.453

(partial model without unconserved sides chains):
PDB file : Tito_3A9X.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3A9X-query.scw
PDB file : Tito_Scwrl_3A9X.pdb: