Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSIEFVRIDDRLVHGQVVTTWLKKYDIEQVIIVNDRISEDKIRQSILKISAPVGLKIVFFSVKRFVEVLNS-VPIKKRTMLIYTNPKDVYDSIEGNLKLEYLNVGQMSKTEENEKVTGGVALGEEDKYYFKKIVDKGTRVEIQMVPNDKVTMLEKFL
2JZN Chain:C ((212-368))MVIGLARIDDRLIHGQVATRWTKETNVSRIIVVSDEVAADTVRKTLLTQVAPPGVTAHVVDVAKMIRVYNNPKYAGERVMLLFTNPTDVERLVEGGVKITSVNVGGMAFRQGKTQVNNAVSVDEKDIEAFKKLNARGIELEVRKVSTDPKLKMMDLI


General information:
TITO was launched using:
RESULT:

Template: 2JZN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 720 -44441 -61.72 -284.88
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain C : 0.79

3D Compatibility (PKB) : -61.72
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.588

(partial model without unconserved sides chains):
PDB file : Tito_2JZN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JZN-query.scw
PDB file : Tito_Scwrl_2JZN.pdb: