Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLKNAKIKILDLDLRGCLYLNNFSHSQRVALFFKIISRAGDGPFWYLMLAIVWGMQGITYSLQIIYLLLGGSVGTAIYKFLKHKTTRPRPYQVH-----QVIVLGERPLDHFSFPSGHTLHAVMVTIVLGYIQPVL-----------------LAAMLPFMVLVALSRMVLGLHYPSDVIVGALIGAAVASLIIFVAPLFGIAL
4CIT Chain:A ((313-448))--------------------------------------------------------------FAYTKASVAMADAFISCWDEKYRSNLIRPETVINQHIDDSWKPVLQTPPFPEYTSGHSVVSGAASVVLTEVFGDNFSFDDDTEVPYGLPIRSFKSFKQAADEAAISRMYGGIHYRAAIEVGVKQGRDLGTFVVNKLH------


General information:
TITO was launched using:
RESULT:

Template: 4CIT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 352 -28416 -80.73 -249.26
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.54

3D Compatibility (PKB) : -80.73
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.54
QMean score : 0.226

(partial model without unconserved sides chains):
PDB file : Tito_4CIT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4CIT-query.scw
PDB file : Tito_Scwrl_4CIT.pdb: