Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDIDAISKALANPLRRQILQWLKEPEHYLPVEECGGSFEKGVCAGHIERLGKVAQSTMSNHLSVLQQAGLIQVQKYGQWSYFSRNEALIQQYIEHLKQTL
3PQK Chain:C ((26-104))---ANLLKTLSHPVRLMLVCTLV---------------EGEFSVGELEQQIGIGQPTLSQQLGVLRESGIVETRRNIKQIFYRLTEAKAAQLVNALY---


General information:
TITO was launched using:
RESULT:

Template: 3PQK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 268 -58118 -216.86 -735.67
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain C : 0.72

3D Compatibility (PKB) : -216.86
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.582

(partial model without unconserved sides chains):
PDB file : Tito_3PQK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PQK-query.scw
PDB file : Tito_Scwrl_3PQK.pdb: