Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKSELIDAIAEKGGVSKTDAGKALDATIASITEALKKGDTVTLVGFGTFSVKERAARTGRNPKTGEELQIKATKVPSFKAGKGLKDSVA
4PT4 Chain:B ((1-90))MNKAELIDVLTQKLGSDRRQATAAVENVVDTIVRAVHKGDSVTITGFGVFEQRRRAARVARNPRTGETVKVKPTSVPAFRPGAQFKAVVS


General information:
TITO was launched using:
RESULT:

Template: 4PT4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 216 -10667 -49.38 -118.52
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain B : 0.88

3D Compatibility (PKB) : -49.38
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.88
QMean score : 0.536

(partial model without unconserved sides chains):
PDB file : Tito_4PT4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4PT4-query.scw
PDB file : Tito_Scwrl_4PT4.pdb: