Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPNCYAIHFYLECFMRKSLIWINLIIAMGALGFTNVVNAKDEYPLHMAAANDDIQLIKHILSQKTLIDARDETGSTALMVATRANNIHAAHMLIEAGADVNAKDNIQDSPYLYAGAQGYLKILRMTLMHGADLKSTNRYGGTALIPAAERGHVETVRTLIAAGVNINHVNNLGWTALLEAIILGNGKSNYQQIVALLLKAGANPNLADKDGITPLQHARTRGYREIEKLLLVAGAK
5AAO Chain:I ((18-165))-----------------------------------------------------------------------------LLEAARAGQDDEVRILMANGADVNAKDSRGKTPLHLAADYGYLEVAEVLLKHGADVNAHDVYGDTPLHLTATWGHLEIVEVLLKNGADANAIDFFGWTPLHLAAYFG-----HLEIVEVLLKYGADVNAQDKFGKTVFDISVYNGDEDLAEIL------


General information:
TITO was launched using:
RESULT:

Template: 5AAO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain I - contact count / total energy / energy per contact / energy per residue : 818 -84408 -103.19 -570.32
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain I : 0.66

3D Compatibility (PKB) : -103.19
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.609

(partial model without unconserved sides chains):
PDB file : Tito_5AAO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5AAO-query.scw
PDB file : Tito_Scwrl_5AAO.pdb: