Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAIKSDRWIREMSE-KHGMIEPYAENQVRFDKNGEKLISYGVSSYGYDVRCAREFKVFTNVHSAIVDPKNFDE--KSFIDI-ESDVCIIPPNSFALARTIEYFRIPRNVLTVCLGKSTYARCGIIVNV--TPLEPEWEGHVTLEFSNTTNLPARIYAGEGVAQMLFFESDEVCETSYKDR--GGKYQGQTGVTLPKT
2QXX Chain:B ((1-181))-MLLSDRDLRAEISSGRLGIDPFDDTLVQP--------------SSIDVRLDCLFRVFNNTRYTHIDPAKQQDELTSLVQPVDGEPFVLHPGEFVLGSTLELFTLPDNLAGRLEGKSSLGRLGLLTHSTAGFIDPGFSGHITLELSNVANLPITLWPGMKIGQLCMLRLTSPSEHPYGSSRAGSKYQGQRGPTPSR-


General information:
TITO was launched using:
RESULT:

Template: 2QXX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 783 11550 14.75 66.76
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain B : 0.76

3D Compatibility (PKB) : 14.75
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.433

(partial model without unconserved sides chains):
PDB file : Tito_2QXX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2QXX-query.scw
PDB file : Tito_Scwrl_2QXX.pdb: