Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAVKIQTSAGTIEITNDVIATVVGGAATDVFGVVGMASKNQIKDNITEILRKENYSRGVVVRQEDNGIAVDVYTIISYGTKISEVSRNVQEKVKYNLEALLGVTANSVNVFVQGVRVLPD
3J1Z Chain:Q ((532-585))----------------------------------------------------------LRTRQAGKTVFIQFHLELDGNLSLNE-AHSITDTTGLRVKAAFED-A-EVIIHQDPV-----


General information:
TITO was launched using:
RESULT:

Template: 3J1Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain Q - contact count / total energy / energy per contact / energy per residue : 155 -19341 -124.78 -358.17
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain Q : 0.58

3D Compatibility (PKB) : -124.78
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.635

(partial model without unconserved sides chains):
PDB file : Tito_3J1Z.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3J1Z-query.scw
PDB file : Tito_Scwrl_3J1Z.pdb: