Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDNPEISVVPVPETEIKKITLKNDYLEVVLLNYGARLHQIFAPDKEGKSENVLLSYDRFEDVLTDKSFFGATVGPVAGRIRDASWG----EHRLEKNCGSHHIHGGTKGWSFQFWEVEVFKTPSSIGVVFY--LKDEFSTYPGPITATITYRLTK-NELEMTTSAS-SLVETICNPTNHAYFNLSGNGTRDIYEHQLTVFLDGVLELDQEKLPTGNWTKKEKLPIDFRKSPTLQEILA-CYP-DGLDDVFLLHHPR-LSKTSLQLFEKHSGRQMTIATSNKSMVLFSTTGFEADFSVNGKQMHSNYGLAIEPQEIPDIVHFPKFGSINLHPGQERISQTIYRFSAQ
1LUR Chain:B ((12-337))--------------SGFIEIANKQGLTATLLPFGATLAKLTFPDKNGKNQDLVLGFDTIDEFEKDAASIGKTVGRVANRIKNSTLHFDGKQYTMTPNNGPHYLHGGPNGLGYRKWEVVRHAP---ESVSFSVRANEQDDGLPGDAKIDVTYTVNDRNQLIIEHH-ATCDTPGLLALTNHAYWNLDGSD--TVAEHFLEMEADEFVEVDDTFCPTGAIRSVTDTGFDFRSGKQLKESGKDAEELLDLDNDLVITKKTP--STYLRFWSEKSGIELSITTSYPVIHLYASKFLDCKG-KKGEHYKANKALAIEPQFHSAAPNFDHFPDVSLRPGDHYCQEIVYTFSH-


General information:
TITO was launched using:
RESULT:

Template: 1LUR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1910 25793 13.50 82.93
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain B : 0.74

3D Compatibility (PKB) : 13.50
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.440

(partial model without unconserved sides chains):
PDB file : Tito_1LUR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1LUR-query.scw
PDB file : Tito_Scwrl_1LUR.pdb: