Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSNSHHATESLSQDKKHAGKVGKMKLKQLPLEYQKAIPVLKKLENAGYEAYFVGGSVRDILLNQPIHDVDIATSA----FPEEIKQLFPKTIDIGIEH----GTVLVLENDEQYEITTFRTESTYQDYRRPDHVEFVRSLSEDLKRRDFTINAFALKED----GEIIDLFDGLQDLEEQILRAVGNPHERFHEDALRMMRGLRFVSQLGFKLEEETFYAIKENHELLGKISVERINVEFIKMLLGNERAAGIHAFIETECYICCPGLKEEGEALLRLLNYHPSH
3H3A Chain:A ((37-205))-------------------------------------------------VYVVGGFVRDLLLGIKNLDIDIVVEGNALEFAEYAKRFLPGKL---VKHDKFMTASLFLKGGLRIDIATA---------------E-MSTIKKDLYRRDFTINAMAIKLNPKDFGLLIDFFGGYRDLKEGVIRVLHTLS--FVDDPTRILRAIRFEQRFDFRIEETTERLLKQAVE-----------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3H3A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 622 -617 -0.99 -4.31
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -0.99
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.434

(partial model without unconserved sides chains):
PDB file : Tito_3H3A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3H3A-query.scw
PDB file : Tito_Scwrl_3H3A.pdb: