Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEQLLPNQLEGAYDRDGKGLSVADAMPGGKQRFAIIGSEEFDWTIDQEKYIYPNHRGIDHYDRFKEDLALFAEMGFKCYRFSIAWTRIFPNGDEGTPNEAGLEFYDQLIDECLKYDIEPVITISHYEMPLHLAKEYGGWKNRKLIDFYERFAQTVLERYSSKVKYWMTFNEINSAFHFPALSQGLVKSNGARRVPKYFPSMA
4ZFM Chain:D ((30-198))-------QVEGAWNEDGKGLSVWDV-------FAKQPGRTFKGT--------NGDVAVDHYHRYQEDVALMAEMGLKAYRFSVSWSRVFPDGN-GAVNEKGLDFYDRLIEELRNHGIEPIVTLYHWDVPQALMDAYGAWESRRIIDDFDRYAVTLFQRFGDRVKYWVTLNQQNIFISF------------------------


General information:
TITO was launched using:
RESULT:

Template: 4ZFM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 659 -65991 -100.14 -425.75
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain D : 0.80

3D Compatibility (PKB) : -100.14
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.588

(partial model without unconserved sides chains):
PDB file : Tito_4ZFM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ZFM-query.scw
PDB file : Tito_Scwrl_4ZFM.pdb: