Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMTRSSHRKKSKHVALLSVLGVLLVLISFYTYRSTYYTKHFLPNTEINGINVSNLTVEKANEKLKEAYSDKKLAIKEDGKVWQEVPKSELGYKDDFTSELSPILNEQNGWTWGMTYVSAAEKQEIDPVSQNHQKLDTTVQTLTTKLTDLNKDRTPTTDATIEKAGDSFVIKPEVNGNTIDVDAAVKQLKSAVNSGKDTIELTEFKEKPKVTSEDSSLKEQLASMNAIANVKATYSINGETFQIPSSDIMSWLTYNDGKVDLDTEQVRQYVTDLGTKYNTSTNDTKFKSTKRGEVTVPVGTYSWTIQTDSETEALKKAILAGQDFTRSPIVQGGTTADHPLIEDTYIEVDLENQHMWYYKDGKVAL-ETDIVSGKPTTPTPAGVFYVWNKEEDATLKGTNDDGTPYESPVNYWMPIDWTGVGIHDSDWQPEYGGDLWKTRGSHGCINTPPSVMKELFGMVEKGTPVLVF
5BMQ Chain:A ((123-237))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KKGKTVCVDLTHQTLWVVEDGKRIFEPTVVRTGMAGYATQPGAWKIFVKEGTHWSK-------KYKVWLPYWQNFNN-GEGLHTTTTYIHEPW-----IGSHGCVNLLPSDSKKLYEMLDFGDTVQVF


General information:
TITO was launched using:
RESULT:

Template: 5BMQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 555 -14569 -26.25 -127.80
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -26.25
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.618

(partial model without unconserved sides chains):
PDB file : Tito_5BMQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5BMQ-query.scw
PDB file : Tito_Scwrl_5BMQ.pdb: