Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTDSQQSKPKHVMMMAAGTGGHVFPALAVAKQLQQQGCQVSWLATPIGMENRLLKDQNIPIYQIDIQGVRGN-G---V--------------IRKLAAP---FK-ILKATFSAMRYMKQLKVDAVAGFGGYVAGPGGLAARLLGIPVLIHEQNAVAGF---------TN----AQLSRVAKVVCEAFPNT----FPAS---EKVVTTGNPVRREITDILSPKWRYDEREQ-AGKPLNILIVGGSLGAK--ALNERLPPALKQLQVPLNIFHQCGQQQVEATQALYADAPANLTVQVLPFIEDMAKAYSEADLIICRAGALTVTEVATAGVAAVFVPLPIAVDDHQTANAKFLADVGAAKICQQSTMTPEVLNQLFTTLMNRQLL-TEMAVKARQHAQPNATQHVVGLIQKM
3OTH Chain:A ((14-404))--GHIEGRHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFA--GTLRKLGFEPVATGMPVFDGFLAALRIRFDTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERLRPDLVVQEIS--NYGAGLAALKAGIPTICHGVGRDTPDDLTRSIEEEVRGLAQRLGLDLPPGRIDGFGNPFIDIFPPSLQEPEFRARPRRHELRPVPFAEQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDGLAGL--DADVLVASGPSLDV-SG--LGEVPAN--VRLESWV-PQAALLPHVDLVVHHGGSGTTLGALGAGVPQLSFPWAG----DSFANAQAVAQAGAGDHLLPDNISPDSVSGAAKRLLAEESYRAGARAVAAEIAAMPGPDEVVRLLP--


General information:
TITO was launched using:
RESULT:

Template: 3OTH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1941 -36957 -19.04 -107.12
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -19.04
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.416

(partial model without unconserved sides chains):
PDB file : Tito_3OTH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3OTH-query.scw
PDB file : Tito_Scwrl_3OTH.pdb: