Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTRIALLDYGMGNLHSAAKALEYVGATVDVTNDP---KL--IAQADKIVFPGVGAMRDC--MQGMREAGIDEVVRK-AAFNKPVLAICVGMQALLQSSEENGGVDALGIFDGVVKHFPQMEGLKVPHMGWNQVHQMD------------------------------PSHPMWNNIEQ-DARFYFVHSYYVEPKDE-NLVAATCEYGVNFCTAI-HKDNLFATQFHPEKSH-TAGLQLLKNFVEWNI
4WIN Chain:A ((18-240))YDKILVLNFGSQYFHLIVKRLNNIKIFSETKDYGVELKDIKDMNIKGVILSGGPYSVTEAGSPHLK----KEVFEYFLEKKIPIFGICYGMQEIAVQMNG------------EVKKSK------TSEYGCTDVNILRNDNINNITYCRNFGDSSSAMDLYSNYKLMNETCCLFENIKSDITTVWMNHNDEVTKIPENFYLVSSSENC-LICSIYNKEYNIYGVQYHPEVYESLDGELMFYNFAYNI-


General information:
TITO was launched using:
RESULT:

Template: 4WIN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 755 -17053 -22.59 -94.22
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -22.59
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.484

(partial model without unconserved sides chains):
PDB file : Tito_4WIN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4WIN-query.scw
PDB file : Tito_Scwrl_4WIN.pdb: