Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIKLIRADQYTKMLWKNGAGFTLEIARSQGEADFEWRISMADVTTSGPFSLFPNKQRIISVLDGQGMVLHVDDLPAKKLKQGDIFAFHGESQVQSELVDGAIRDLNLIYDPAKFHARFQWLNEAAEQAFISSADLIFIFNQGDETEVNVDEHSVQLAAHETLKIEKKSGVTSINFPKKQFKCCYIIELIQR
5IK2 Chain:P ((1-134))-MATVQVDIVTP-----------ERKVFQGEADIVIARG-----VEGELGVMAGHIPLVTPLKTAPVRIKQGD------KETLIAVSGGFLEVRPD-------KVNILADTAELPEEI-----AVEAAKKAKARHETILKRLDKTDKDYLRHKRALERAEVRLQVANSK----------------------


General information:
TITO was launched using:
RESULT:

Template: 5IK2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain P - contact count / total energy / energy per contact / energy per residue : 585 -38873 -66.45 -290.09
target 2D structure prediction score : 0.31
Monomeric hydrophicity matching model chain P : 0.63

3D Compatibility (PKB) : -66.45
2D Compatibility (Sec. Struct. Predict.) : 0.31
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.153

(partial model without unconserved sides chains):
PDB file : Tito_5IK2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5IK2-query.scw
PDB file : Tito_Scwrl_5IK2.pdb: