Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MKKLLIASLIAISSSSIFAADTTASAAKNDVFKQAEQLYAAKNYPAAFQEVQRLAQTGNAQAIYNLGYMTQMGQGTAKDNAKALKYYEDASNKGYAQASYTLAQIYETGELGVAKDSNKFSQYIQKAAAQGSDDATVKIATILFA-QKKPQSHQIALQKLAPLIRKGNYPAI-QVKALYDI-SQGVENKNPLMKRQGIEALQTIAQKGYAPASMALATMMANGNIIPQNLPQAKQIFTELAKQNVPNARESLASVEKIIAEKNKQAAAAPTQPAPKK 5JJO Chain:A ((38-242)) ---------------------------------------TLRPWDRIVDLYSKAVERGHWKAMHNLASLYRTGW---KDTQKALDLYQKMIDLKVPQGFYDMAAMIGNR-AGVKNPATDGLTFLDKAASLGNPPALTELGRLYIYVAG---QDELGLKYTNCAAGQGYAPANYELAMYYRLVA--------HNYPKAAGYYLLAASQGNDDAAFFMSGVFDK-T----SPDVDRMWYAP--DEKLHKLYDGIYDQLAADPD----------------

General information: TITO was launched using: RESULT: Template: 5JJO.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 853 -24855 -29.14 -126.17 target 2D structure prediction score : 0.63 Monomeric hydrophicity matching model chain A : 0.67 3D Compatibility (PKB) : -29.14 2D Compatibility (Sec. Struct. Predict.) : 0.63 1D Compatibility (Hydrophobicity) : 0.67 QMean score : 0.438

(partial model without unconserved sides chains): PDB file : Tito_5JJO.pdb: (Unconserved sides chains are recalculated) : Sequence: align-5JJO-query.scw PDB file : Tito_Scwrl_5JJO.pdb: