Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---------MATRITNQKLSKSSR----AWMREHLDDPFVKKAQKEGYRARAAYKLLEIQEKYKLIKPGMTVVDLGAAPGSWSQIAGKLVGSKGLVIASDILPMDALPDVTFLQGDFREEAVFEKLLNILNGR--QVDIVISDMAPNTSGNRAVDQPRQIYLCELALDFAQKVLGPNGQFVVKVFQGAGFDEFRKQVVDSFDVLKTA------KPAASRARSKEVFLVGQGRKKALQ-------------------------------------
1L9K Chain:A ((16-276))ETLGEKWKSRLNALGKSEFQIYKKSGIQEVDRTLAKEGIKRGETDHHAVSRGSAKLRWFVER-NLVTPEGKVVDLGCGRGGWSYYCGGLKNVREVKGLTKGGPGHEEPIPMSTYG--WNLVRLQSGVDVFFIPPERCDTLLCDI-----GESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP-----YMSSVIEKMEALQRKHGGALVRNPLSRNSTHEMYWVSNASGNIVSSVNMISRMLINRFTMRHKKATYEPDVDLGSGTRNIGI


General information:
TITO was launched using:
RESULT:

Template: 1L9K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 916 16321 17.82 80.40
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : 17.82
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.434

(partial model without unconserved sides chains):
PDB file : Tito_1L9K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1L9K-query.scw
PDB file : Tito_Scwrl_1L9K.pdb: