Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKNSVQYLFSCLLGMTTFSVGITPTSAGQMYIYQDKNGSTLLTNRKSYDHSLKKVKVTYYPDSNIHSYSNWGTSEASVLPSYSKNKNAFDHIIKQAAQQHGVSEGLIKAVMHTESGFNVNVRSPVGAQGLMQLMPATA-----RRFN------VSNAYDPQQNIFAGAKYLSWLLKRFNGNTQMALAAYNAGEGNVDKYGGIPPFRETQDYVRRVTSRYQNLYSSGVGLSSFSNSSISAQAINQPAIPHSTSTQVSAQPIKYSSSRQIVTLPDGTYTDAPTGTYVTNNATAIAHIRIE
4HJY Chain:A ((45-127))-------------------------------------------------------------------------------------------ISQKAGAAWGVDPQLITAIIAIQSGGNPNAVSKSNAIGLMQLKASTSGRDVYRRMGWSGEPTTSELKNPERNISMGAAYLNIL----------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4HJY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 248 -15996 -64.50 -222.17
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : -64.50
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.552

(partial model without unconserved sides chains):
PDB file : Tito_4HJY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4HJY-query.scw
PDB file : Tito_Scwrl_4HJY.pdb: