Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSDFLSEHLIYRDDDFMVIHKPSDILSVPGKGDLHDSVLTRLVAI------EPRTLLIHRLDRDTSGILVFGLSKRGQSAIARQFQDRQTSKIYEALVAGHLEGEGTVDIPVVYDPSRPPLHIVDASHNKPALTHWQAIEHFQIQGQPVTRVKLTPITGRSHQLRVHMQYLGHPIVGDTLYATPEQL-------------LVPRLCLHAKQLSFNHPVTGESLTFNCPVPF
1V9F Chain:A ((81-302))----IPLDIVYEDEDIIIINKPRDLVVHPGAGNPDGTVLNALLHYYPPIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQRREITREYEAVAIGHMTAGGTVDEPISRHPTKRTHMAVH-PMGKPAVTHYRIMEHF----RVHTRLRLRLETGRTHQIRVHMAHITHPLVGDPVYGGRPRPPKGASEAFISTLRKFDRQALHATMLRLYHPISGIEMEWHAPIPQ


General information:
TITO was launched using:
RESULT:

Template: 1V9F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1028 -19082 -18.56 -94.00
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -18.56
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.411

(partial model without unconserved sides chains):
PDB file : Tito_1V9F.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1V9F-query.scw
PDB file : Tito_Scwrl_1V9F.pdb: