Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MSDKTQKQTTKIVQFEQESYVDPKGKTLTSSLGVPVSDNQNSLKIGGRGPTLLEDFLLRDKLIHFDRERIPERVVHARGFGAHGYFEAYKGNEKWTKAHFLTDTTQSTPIFVRISTVQGGRGSADVVRDVRGFSIKFYTQEGNYDLVGNNIPVFFIQDAIKFPDFVHAVKPEDPNEVPTGQSAHDTFWDFISLNTETAHMTTWVMSDRAIPRNLRSIQGFGVHTFRLINAQGKAHLVKFHWTPKQGVAQVVWDEALKLNGKDPDFHRRDLWDAIENGNYPEWELGAQIFTEEEASEWDFDVLDPTKLVPEELVPVTPLGRFVLNRNTDDFFAETEQVAFSPANIVSGIDFSNDPLLQGRLFSYTDTHLHRLGTANFNQIPINKPVCPFHTNRRGGFANHEVYKGKANYEPNSVGDNWPREV--GQKEGGFSSYPEHVEASKLRIRPESFADHFSQATLHYMSLEKHEQQHIKDAYAFELSKVQDEEIRQRVVDHVLVNIDEDLATCVANELGLKPS-----VKPESKKQSKVKISKKLSTEAFPAPDIKQRKIAVLVHDGANATSVDAVRAWAESENAVAEVLAPTTAPVKSKDGKEITVDGRQNGEPSVTYDAIVVIDGDNLEAFKADGVAKHYVLETYKHLKSIYLLGDKESLLEYFGI--EQDNAIFSSKNFE-EHQDKFKKAIQNHRLWSRENVVASIPA 1GGE Chain:C ((79-753)) --------------------------ALTTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSAAHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFATKFYTEEGIFDLVGNNTPIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRTMEGFGIHTFRLINAEGKATFVRFHWKPLAGKASLVWDEAQKLTGRDPDFHRRELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPTKLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPYHNFQRDGMHRMGIDTNPANYEPNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPSFGEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQ-LAHIDLTLAQAVAKNLGIELTDDQLNITPPPDVNG-LKKDPSLSLYAIPDGDVKGRVVAILLNDEVRSADLLAILKALKAKGVHAKLLYSRMGEVTADDGTVLPIAATFAGAPSLTVDAVIVPCG-NIADIADNGDANYYLMEAYKHLKPIALAGDARKFKATIKIADQGEEGIVEADSADGSFMDELLTLMAAHRVWSRIPKIDKIPA

General information: TITO was launched using: RESULT: Template: 1GGE.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 3683 14618 3.97 21.98 target 2D structure prediction score : 0.62 Monomeric hydrophicity matching model chain C : 0.85 3D Compatibility (PKB) : 3.97 2D Compatibility (Sec. Struct. Predict.) : 0.62 1D Compatibility (Hydrophobicity) : 0.85 QMean score : 0.481

(partial model without unconserved sides chains): PDB file : Tito_1GGE.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1GGE-query.scw PDB file : Tito_Scwrl_1GGE.pdb: