Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMILFTLRKKGGKRYMNYFISDMHFFHERLLGKNDFAPRLFANVDEMNQQLITSWNAVIKETDHVYHLGDLA---MHPQYEKANAEILELVTQLQGTIHLIKGNHDSRAFFRYLEKNDPRLTDGSPKFYFYDVGAIVKFDHQQYYLTHYPMLLGPNDTIRNLHGHIHHYSVPI---ENDVNVGVDAPERELLKEKLPFGTPLSEQQIKEIYEAKRKYDRS---------------------------------
2HY1 Chain:A ((12-267))---------PRPDYVLLHISDTHL----------------IDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGEPAAYRKLRGLVEPFAAQLGAELVWVMGNHDDRAELRKFLLDEAPSMAPLDRVCMIDGLRIIVLDTSVPGHHHGEIRASQLGWLAEELATPAPDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRGTDVRAILAGHLHYSTNATFVGIPVSVASATCGCNLVHVYPDTVVHSVIP


General information:
TITO was launched using:
RESULT:

Template: 2HY1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 938 -14503 -15.46 -77.14
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -15.46
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.276

(partial model without unconserved sides chains):
PDB file : Tito_2HY1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2HY1-query.scw
PDB file : Tito_Scwrl_2HY1.pdb: