Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence------RPSKGRLKRVVI---------CEVFIRMSGGLDLPIGKDFVPAGETTKIHAYTCET------------DTMC-----GAEC----DTPSNYRYSSWVLERELRDWEKARLRARLALASSPESRERANMLVKLLC--------
3WEB Chain:A ((1-132))FVFEDCGSEVGKFSDIIISSCDPSEEKCSII----RESEIHVSMKFTPSVDVKNVEAKAFGVLLDVPVPFPLKKPEICKDPDSGVKCPLKKDVEIEYKVTFFV------EKATPALSLEIMWEFRNEKDE------KITCVKFPAKIK


General information:
TITO was launched using:
RESULT:

Template: 3WEB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 228 8320 36.49 94.54
target 2D structure prediction score : 0.38
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : 36.49
2D Compatibility (Sec. Struct. Predict.) : 0.38
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.077

(partial model without unconserved sides chains):
PDB file : Tito_3WEB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3WEB-query.scw
PDB file : Tito_Scwrl_3WEB.pdb: