Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAAMETETAPLTLESLPTDPLLLILSFLDYRDLINCCYVSRRLSQLSSHDPLWRRHCKKYWLISEEEKTQKNQCWKSLFIDTYSDVGRYIDHYAAIKKAWDDLKKYLEPRCPRMVLSLKEGAREEDLDAVEAQIGCKLPDDYRCSYRIHNGQKLVVPGLLGSMALSNHYRSEDLLDVDTAAGGFQQRQGLKYCLPLTFCIHTGLSQYIAVEAAEGRNKNEVFYQCPDQMARNPAAIDMFIIGATFTDWFTSYVKNVVSGGFPIIRDQIFRYVHDPECVATTGDITVSVSTSFLPELSSVHPPHYFFTYRIRIEMSKDALPEKACQLDSRYWRITNAKGDVEEVQGPGVVGEFPIISPGRVYEYTSCTTFSTTSGYMEGYYTFHFLYFKDKIFNVAIPRFHMACPTFRVSIARLEMGPDEYEEMEEEEEEEEEEDEDDDSADMDESDEDDEEERRRRVFDVPIRRRRCSRLF
2F1E Chain:A ((6-121))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYRVEVEVSPRFLAHQSTPDEGRYAFAYSIRIQNAG----AVPARLVARHWQITDGNGRTEQVDGEGVVGEQPWLRPGEAFHYTSGVLLETEQGQMQGHYDMVAD--DGTEFIAPIAAFVLS---------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2F1E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 531 -61078 -115.02 -526.53
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -115.02
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.458

(partial model without unconserved sides chains):
PDB file : Tito_2F1E.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2F1E-query.scw
PDB file : Tito_Scwrl_2F1E.pdb: