Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIEIKRIQQQPDLAQDIYAVMAAVYPVSPWTLEQIQADLSQDQTWYALAYDGAEVIGFLTVQETLFEAEVLQIAVKGAYQGQGIASALFAQLPTDKE------IFLEVRQSNQRAQAFYKKEKMAVIAERKAYYHDPV----EDAIIMKREIDEG
2CNM Chain:C ((53-142))--------------------------------------------------------AFAITQVVLDEATLFNIAVDPDFQRRGLGRMLLEHLIDELETRGVVTLWLEVRASNAAAIALYESLGFNEATIRRNYY--PTAQGHEDAIIM-------


General information:
TITO was launched using:
RESULT:

Template: 2CNM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 229 -19549 -85.37 -244.36
target 2D structure prediction score : 0.43
Monomeric hydrophicity matching model chain C : 0.65

3D Compatibility (PKB) : -85.37
2D Compatibility (Sec. Struct. Predict.) : 0.43
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.228

(partial model without unconserved sides chains):
PDB file : Tito_2CNM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2CNM-query.scw
PDB file : Tito_Scwrl_2CNM.pdb: