Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----------------------------------------------MDIRQVTETIAMIEEQNFDIRTITMGISLLDC---IDPNIN---RAAEK-------IYQKITTKAANLVAVGDEIAAELGIPIVNKRVS----------VTPISLIGAA------TDATDYVVLAKALDKAAK--EIGVDFIGGFSALVQKGYQKGDEILINSIPRALAE--TDKVCSSVNIGSTKSG----INMTAVADM----------------------------------------------------------GRIIKETANLSDMGVAKLVVFA--NAVEDNPFMAGAFHGV---------------GEADVIINVGVSGPGVVKRALEKVRGQSFDVVAETVKKTA-----FKITR-----------IGQLVGQMASERLGVEFGIVDLSLAPTPAVGDSVARVLEEMGLETV--GTHGTTAALALLNDQVKKG-GVMACNQV--GGLSGAFIPVSEDEGMIAAVQNGSLNLEKLEAMTAICSVGLDMIAIPEDTPAETIAAMIADEAAIG--------VINMKTTAVRIIPKGREGDMIEFGGLL------GTAPVMKVNG-------------------ASSVDFISRGGQIPAPIHSFKN
4M1K Chain:A ((6-688))EYDLKRLRNIGIAAHIDAGKTTTTERILYYTGRIAAVTTCFWKDHRINIIDTPGHVDFTIEVERSMRVLDGAIVVFDSSQGVEPQSETVWRQAEKYKVPRIAFANKMDKTGADLWLVIRTMQERLGARPVVMQLPIGREDTFSGIIDVLRMKAYTYGNDLGTDIREIPIPEEYLDQAREYHEKLVEVAADFDENIMLKYLEGEEPTEEELVAAIRKGTIDLKITPVFLGSALKNKGVQLLLDAVVDYLPSPLDIPPIKGTTPEGEVVEIHPDPNGPLAALAFKIMADPYVGRLTFIRVYSGTLTSGSYVYNTTKGRKERVARLLRMHANHREEVEELKAGDLGAVVGLKETITGDTLVGEDAPRVILESIEVPEPVIDVAIEPKTKADQEKLSQALARLAEEDPTFRVSTHPETGQTIISGMGELHLEIIVDRLKREFKVDANVGKPQVAYRETITKPVDVEGKFIRLTGGRGQYGHVKIKVEPLPRGSGFEFVNAIVGGVIPKEYIPAVQ-KGIEEAMQSGPLIGFPVVDIKVTLYDGSYHEVDSSEMAFKIAGSMAIKEAVQKGDPVILEPIMRVEVTTPEEYMGDVIGDLNARRGQILGMEPRGNAQVIRAFVPLAEMFGYATDLRSKTQGRGSFVMFFDHYQEVPKQVQEKLI


General information:
TITO was launched using:
RESULT:

Template: 4M1K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2457 78666 32.02 177.18
target 2D structure prediction score : 0.39
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : 32.02
2D Compatibility (Sec. Struct. Predict.) : 0.39
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.170

(partial model without unconserved sides chains):
PDB file : Tito_4M1K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4M1K-query.scw
PDB file : Tito_Scwrl_4M1K.pdb: