Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLEAVHTEKQWERSATELPPFIIKRLPVRLTFDNNYFNDRYQVIPIGGYNVIIENILKD--VEVGLGVDCFDYREELE--ASANKVAFTGMIDQYFDYKHGELEYRSLRFKHEVLDEENHQGNAVVNYTDREIPYTRIIEHKKF----EYGLQPKTVITHEYPADWKRGDEPYYPINDEKNNAIFSKYHEEA---SQNDKVIFCGRLADYKY
4RPH Chain:C ((161-366))-----YTAKQWQTDPKELPAANITRLPVRYTFDNRYFSDTYEGLPTDGYTAWLQNMAADHRIEVRLNTDWFDVRGQLRPGSPAAPVVYTGPLDRYFDYAEGRLGWRTLDFEVEVLPIGDFQGTAVMNYNDLDVPYTRIHEFRHFHPERDYRTD-KTVIMREYSRFAEDDDEPYYPINTEADRALLATYRARAKSETASSKVLFGGRLGTYQY


General information:
TITO was launched using:
RESULT:

Template: 4RPH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 546 11995 21.97 61.51
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain C : 0.83

3D Compatibility (PKB) : 21.97
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.372

(partial model without unconserved sides chains):
PDB file : Tito_4RPH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RPH-query.scw
PDB file : Tito_Scwrl_4RPH.pdb: