Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRVRNRKGATELLEANPQYVVLNPLEAKAKWRDLFGNDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTD-YFEDGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNRGLFEYSLVSFSQY-GMKLNGVWLDLHASDFEGNVMTEYEQKFSNKGQVIYRVEAEF
3DXY Chain:A ((24-208))---------------------------MLDFPALFGREAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDWEPYAEHMLEVMSSIDGYKNLSESNDYVPR-PASRPVTKFEQRGHRLGHGVWDLMFER


General information:
TITO was launched using:
RESULT:

Template: 3DXY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 901 -39202 -43.51 -214.22
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -43.51
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.368

(partial model without unconserved sides chains):
PDB file : Tito_3DXY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DXY-query.scw
PDB file : Tito_Scwrl_3DXY.pdb: