Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKNILKKKGVTGLFKMKSCNLDQALHEHFSEEELAGHFHVLLWTFLQWHCYHTQYLSKRLVRKLYCSSSSKFPNC
1JEQ Chain:A ((580-609))MLKEACRAYGLKS--GLKKQELLEALTKHFQD--------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1JEQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 59 -4091 -69.33 -136.35
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : -69.33
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.529

(partial model without unconserved sides chains):
PDB file : Tito_1JEQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1JEQ-query.scw
PDB file : Tito_Scwrl_1JEQ.pdb: