Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEFEEKTLSRKEIYQGPIFKLVQDQVELPEGKGTARRDLIFHNGAVCVLAVTDEQKLILVKQYRKAIEAVSYEIPAGKLEVGENTAPVAAALRELEEETAYTGKLELLYDFYSAIGFCNEKLKLYLASDLTKVENPRPQDEDETLEVLEVSLEEAKELIQSGHI-CDAKTIMAVQYWELQKK
1V8Y Chain:A ((11-164))---------RTYLYRGRILNLALE----------GRYEIVEHKPAVAVIALR-EGRMLFVRQMRPAVGLAPLEIPAGLIEPGED--PLEAARRELAEQTGLSGDLTYLFSYFVSPGFTDEKTHVFLAENLKEVE----------IEVVWMRPEEALERHQRGEVEFSATGLVGVLYYH----


General information:
TITO was launched using:
RESULT:

Template: 1V8Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 674 -79417 -117.83 -547.70
target 2D structure prediction score : 0.40
Monomeric hydrophicity matching model chain A : 0.81

3D Compatibility (PKB) : -117.83
2D Compatibility (Sec. Struct. Predict.) : 0.40
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.247

(partial model without unconserved sides chains):
PDB file : Tito_1V8Y.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1V8Y-query.scw
PDB file : Tito_Scwrl_1V8Y.pdb: