Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLFSGSSMSEQIFIQGPVGKIELFVDRPEGEIKGFAVVCHPHPLQGGTPQHKVPALLTQIFNEYGCIVYRPSFRGLGGSEGVHDEG--HGETEDILAVIEHVRKLHAGLPFYAGGFSFGSHVLAKCHAQLSPELQPVQLILCGLPTATVVGLRHY-------------------------------------KTPEIQGDILLIHGEQDDITLLSDAIEWAK-PQKHPITILSGANHFFTGYLKQLRQIITRFIIMK---
2WTM Chain:A ((2-251))---------GAMYIDCDGIKLNAYLDMPKNNPEKCPLCIIIHGFTGHSEERHIVAV-QETLNEIGVATLRADMYGHGKSDGKFEDHTLFKWLTNILAVVDYAKKLDFVTDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAMIPEIARTGELLGLKFDPENIPDELDAWDGRKLKGNYVRVAQTIRVEDFVDKYTKPVLIVHGDQDEAVPYEASVAFSKQYKNCKLVTIPGDTHCYDHHLELVTEAVKEFMLEQIAK


General information:
TITO was launched using:
RESULT:

Template: 2WTM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1148 -49018 -42.70 -236.80
target 2D structure prediction score : 0.78
Monomeric hydrophicity matching model chain A : 0.68

3D Compatibility (PKB) : -42.70
2D Compatibility (Sec. Struct. Predict.) : 0.78
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.474

(partial model without unconserved sides chains):
PDB file : Tito_2WTM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2WTM-query.scw
PDB file : Tito_Scwrl_2WTM.pdb: