Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEFVFNGFYTLISAVIVLLLGRFLVNRIDFLERYNIPEPVAGGLVAAVVSL-LVHTFWGYSIVFSSELQTSFMLV--FFASIGLSAN----FMKLKEGGTALVIFLICVASFIVVQNAVGMSLATLLGLDPLIGLIAGSITLTGGHGTAGAWGEILESQHGIQGALALGMASATFGLIMCVIGGPLAKLLINRYSLAQAK---TNAEIQQRDTHVEQNSDDLAPFENPHQVRLITADNAITTLGMFAACLAFAEFMTGFSKGTWFELPTFVWALGGGVILRNILESVLKV------DIFDRAIDVFGNASLSLYLA--MALLSLKLWQLADLAGPLVVILVAQTLTMA--------LYAAFVTFRVMGKNYDAAVLAASHCG----FGMGATPTAVANMQ-AITNMYGPSHKAFLI-VPLCGAFFVD--LINATVIQLMLKFIA
5AB5 Chain:A ((19-425))-----------SQVVRIVGVGR---TGIGKLHK-SVDELAASALKCALVDANMKQCDLQALIAVPSLASPQFMQAHHIATVAGLFPTKGKFIVRTVDTGGAGPITALGMAVDLVRTRCA--ETVAVIAADAVLSMGSGAFAERSNASLRRSGLPEPCIPHGYDRYAQWYMSRYGLKREQLAMVPVLMSKMAERHPEAMCQKAYTLDEVLHSRCVA------------PVTNLLECARRADGAVALIVSG--EAHYAEHFAQGK----QEQRHLGGSKPIIASVAEASGPLFPPGSSDDIVPDIFSCRHAARDAFLSANLNVGDIHFFGLYDCF-PICLIQAVEAVGLCPEGKGGEFMETAYNEMLNNGGVLDPSKFPINTHGGLQCFGAPWEVPAMYNITEAIAQLSEEAGDRQLTPVPKRALVYGNGGIFSASSVAILISDL-


General information:
TITO was launched using:
RESULT:

Template: 5AB5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2162 -183725 -84.98 -492.56
target 2D structure prediction score : 0.42
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -84.98
2D Compatibility (Sec. Struct. Predict.) : 0.42
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.268

(partial model without unconserved sides chains):
PDB file : Tito_5AB5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5AB5-query.scw
PDB file : Tito_Scwrl_5AB5.pdb: