Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLLVYTLIAIVALIVMIAKFRIYPFLVLIIVSLGLALAVGMPMDGIVKSYEAGTGKTLGHLAIVIALGSMLGKMMAESGGAERIAIALIKWFGEKHIHWAMMFIALIVGLPVFFEVGFVLLIPIAFNIAKRTGKSLLIVGLPMVAG--LSVVHGLIPPHPAALL--AV-QAY-------HADIGKTIMYSLLVGVPTAVVAGPLYALWINKYVKLPENNPLAKQFVEADANNTRELPSFGITLFTIMLPVALMLVGSWADVFFAPKTFPNELLRFIGTSD---IALLIAVLVSFITFGTMQ---GF-NREQIEKFCGGCLASIAGILLIVGAGGGFGGILRDSGISNEIVSTALKA-N---LSPLL---LGWLVAAIIRLATGSATVAMATACSIVAPIAAAAGVVVRPELLVLATGSGS---LIFSHVNDAGFWLIKEYF-G----MTVGQTLKTWSVLETIISVLGLSFTLLLSAVL
4R0C Chain:D ((64-484))----------------------------------------DGLRYLFTTLVGNFTGF-APLG-VVLVAMLGLGVAEQSGLLSVSLASLVRRSSGGALV-FTVAFAGVLSSL-TVDAGYVVLIPLAGLVFQLAGRPPIAGIATAFAAVSGGFSANLLVGPVDATLAGLSTEAAHIIDPDRTVAATGNYWFIIASTFLVTGL-VTLITRTLTEPRLAHANTVADAS-VDAPQIHSRAMKWTGLTLAILLAGLALLVLPND-APLRHPDTG--SV---LGSPFIHGLVVIVALIAGICGAVYGRVSGQFRNSGAVITAMEVTMASMAGYLVLMFFAAQFVAWFNYSQLGLLLAVKGAAWLGALTVPKVVLLLLFVVLTALINLMIGSASAKWSILAPVFIPMLMLLG--ISPEASQAAYRVGDSSTNIITPLMPY-FVLVLGFARRYQPETGIGTLIALMLPYSLTLLLGWSVLLGVWI---


General information:
TITO was launched using:
RESULT:

Template: 4R0C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1867 -208996 -111.94 -540.04
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain D : 0.65

3D Compatibility (PKB) : -111.94
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.356

(partial model without unconserved sides chains):
PDB file : Tito_4R0C.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4R0C-query.scw
PDB file : Tito_Scwrl_4R0C.pdb: