Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKILVTGGAGYIGSHTCVELLEAGHEVIVFDNLSNSSKESLNRVQEITHKSLTFVEGDIRNSGELDQVFQEHAIDAVIHFAGLKAVGESQEKPLIYFDNNIAGSIQLVKSMEKAGVYTLVFSSSATVYDEA----NTSPLNEEMPTGMPSNNYGYTKLIVEQLLQKLSVADSK-WSIALLRYFNPVGAHKSGRIGEDPQGIPNNLMPYVTQVAVGRREKLSIYGNDYDTIDGTGVRDYIHVVDLANAHLCALNNRLQAQG-----CRAWNIGTGNGSSVLQVKNTFEQVNGVPVAFEFAPRRAGDVATSFADNARAVAELGWKPQYGLEDMLKDSWNWQKQNPNGYN
1Z45 Chain:A ((14-355))---VLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLG-PTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIF------RDGTPIRDYIHVVDLAKGHIAAL-QYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPY---------VLNLTAKPDRAKRELKWQTELQVEDSCKDLWKWTTENPFGY-


General information:
TITO was launched using:
RESULT:

Template: 1Z45.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1865 -94132 -50.47 -296.94
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.84

3D Compatibility (PKB) : -50.47
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.84
QMean score : 0.520

(partial model without unconserved sides chains):
PDB file : Tito_1Z45.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1Z45-query.scw
PDB file : Tito_Scwrl_1Z45.pdb: