Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRALIQRVLEAKVEVDGQTTGE--------IKKGLLVFLGLGKEDTLEKGQKLIDKILKYRIFDDEQGKMGWNVSQANGGVLLVSQFTLMAQTQKGLRPDFGPAMPPSDAKALYEQLVEYTRSQFEN--VQTGIFAADMKVHLINDGPVTFNLT
4NBJ Chain:H ((1-152))MRVVIQRVKGAILSVR------KELEIISEIKNGLICFLGIHKNDTWEDALYIIRKCLNLRLWNNDNKTWDKNVKDLNYELLIVSQFTLFGNTKKGNKPDFHLAKEPNEALIFYNKIIDEFKKQYNDDKIKIGKFGNYMNIDVTNDGPVT----


General information:
TITO was launched using:
RESULT:

Template: 4NBJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain H - contact count / total energy / energy per contact / energy per residue : 574 -13528 -23.57 -100.96
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain H : 0.80

3D Compatibility (PKB) : -23.57
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.525

(partial model without unconserved sides chains):
PDB file : Tito_4NBJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4NBJ-query.scw
PDB file : Tito_Scwrl_4NBJ.pdb: