Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--MIVVTLTYKKPLTEV-DAVLKEHIAFLDHY--YEQKKFLASGRRENRVGGVILVLSSSIQEAEEIMKNDPFYIHDVADYDFMWFEPSKSLEEIKEFV
1WD6 Chain:A ((2-98))ATLLQLHFAFNGPFGDAMAEQLKPLAESINQEPGFLWKVWTES-EKNHEAGGIYLFTDEKSALAYLEKHTARLKNLGVEEVVAKVFDVNEPLSQINQA-


General information:
TITO was launched using:
RESULT:

Template: 1WD6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 328 -6198 -18.90 -67.37
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -18.90
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.172

(partial model without unconserved sides chains):
PDB file : Tito_1WD6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1WD6-query.scw
PDB file : Tito_Scwrl_1WD6.pdb: