Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRHRNSGVKLGRTSSHRKAMFQNLANSLFEHELIKTTLPKAKELRRVAEPLITLAKNDTVANRRLAFARTRNAATVGKLFTVLGPRYKERNGGYLRVLKAGFRAGDAAPMAYVELVDREVNTSAE
5MMI Chain:O ((11-126))MKHGRKIHRLSRPADQRRALLRGLTTQLLKHGRIKTTRAKASAMRKYVDKMITLAKEGSLHKRRQALGFIYEKQIVHALFAEVPERYGDRNGGYTRIIRTLPRRGDNAPMAYIELV---------


General information:
TITO was launched using:
RESULT:

Template: 5MMI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain O - contact count / total energy / energy per contact / energy per residue : 390 -44141 -113.18 -380.52
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain O : 0.82

3D Compatibility (PKB) : -113.18
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.576

(partial model without unconserved sides chains):
PDB file : Tito_5MMI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5MMI-query.scw
PDB file : Tito_Scwrl_5MMI.pdb: