Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKLVVFSGAGMSAESGISTFRDSNGLWENYDIQQVATPEAWERNPALVQRFYNERRKNILEAQPNEAHQYIAKLQDHYDVQ-----VITQNIDDPHERAGSQNVLHLHGNIRLAKS------------------SGPDA-QYTTQFYEVNGWKL-DLEQDFCPNGYPLRPHVVWFGEAV-PA-YEEAIRLVQSADIFIVIGSTLSVYPVAALVHEIPHYSKAYYIAPQADHSRVPPQYKLLNMTATEGMHELFNQLTS
4HDA Chain:B ((26-237))---IVIISGAGVSAESGVPTFRGAGGYWRKWQAQDLATPLAFAHNPSRVWEFYHYRREVMGSKEPNAGHRAIAECETRLGKQGRRVVVITQNIDELHRKAGTKNLLEIHGSLFKTRCTSCGVVAENYKSPICPALSGKGAPEPGTQDASIPVEKLPRCEEAGC--GGLLRPHVVWFGENLDPAILEEVDRELAHCDLCLVVGTSSVVYPAAMFAPQV------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4HDA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 881 -5850 -6.64 -31.62
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain B : 0.74

3D Compatibility (PKB) : -6.64
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.378

(partial model without unconserved sides chains):
PDB file : Tito_4HDA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4HDA-query.scw
PDB file : Tito_Scwrl_4HDA.pdb: