Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSLLNHFATELDELKQQGNFRQFT--QNVQHGRFI-------TIQNKTMLNLASNDYLGLAADINLRQEFLDSYPLERSYFSSSSSRLLTGNFDEYEQLENSLSQAFSGRAALLFNSGYHMNIGILPAVA--DSKTLILADKLVHASMIDGIRLSGAQYVRYRHNDLQHLEQLLQKYHDDDQIERIIVVTESIFSMDGDETDLTALVQLKKRFAKTMLYVDEAHSIGVRGQQGLGCAEQYNVIQEIDFLVGTLGKALAAVGGYIICDQIIKDYLINKMRPLIFSTAQPPIVMAWANFIFKKVLMA--QSQREHLKNISQYLQQAVVQKGYVS-PSTSHIIPVIVGESQATIDKAKQVQ-ESGFYAMPVRPPTVPKNSSRLRISLTSMVEQHELEALVSFL
2BWO Chain:E ((1-393))MDYNLALDKAIQKLHDEGRYRTFIDIEREK-GAFPKAQWNRPDGGKQDITVWCGNDYLGMGQHPVVLAAMHE--ALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQKEAALVFSSAYNANDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRHNDVAHLRELIAADD---PAAPKLIAFESVYSMDGDFGPIKEICDIAEEFG-ALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFGGYIAASARMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKALGMPIIDHGSHIVPVVIGDPVHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAM


General information:
TITO was launched using:
RESULT:

Template: 2BWO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 2091 3 0.00 0.01
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain E : 0.75

3D Compatibility (PKB) : 0.00
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.498

(partial model without unconserved sides chains):
PDB file : Tito_2BWO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2BWO-query.scw
PDB file : Tito_Scwrl_2BWO.pdb: