Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSDATLIANDAKNIVQAHLDRLGEPKDNRLSEEAKQQKFAQIEAELKKRDAVLVAHYYCDPDVQELAEKTGGCVSDSLEMARFGRDHAASTLVVAGVKFMGETAKILSPEKTILMPTLEATCSLDLGCSVDEFTAFCDQHPDHTVVVYANTSAAVKARADWVVTSSCAVEIVEHLDSLGEKIIWAPDQHLGRYIQKKTGADM--LLWDGACIVHEEFRARGIANMKALYPDAAVLVHPESPESVVEIADAVGSTSQLIKAAQTLPHQRLIVATDRGIFYKMQQAVPVKILVEAPTAGEGATCRSCAHCPWMAMNELDGILEVLQKGDQEIHVDSALAERAKMPLDRMLAFSASLKR
5F33 Chain:A ((8-305))-------------------------------------MVDEILKLKKEKGYIILAHNYQIPELQDIA----DFVGDSLQLARKAMELSEKKILFLGVDFMAELVKILNPDKKVIVPDRSATCPMANRLTPEIIREYREKFPDAPVVLFVNSTSECKTLADVICTSANAVEVVKKLD--SSVVIFGPDRNLGEYVAEKTGKKVITIPENGHCPVHQ-FNAESIDAVRKKYPDAKVIVHPECPKPVRDKADYVGSTGQMEKIPERDPSRIFVIGTEIGMIHKLKKKFPDREFVPLE----------MAVCVNMKKNTLENTLHALQTESFEVILPKEVIEKAKKPILRMFELMG----


General information:
TITO was launched using:
RESULT:

Template: 5F33.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1757 -97291 -55.37 -328.68
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -55.37
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.622

(partial model without unconserved sides chains):
PDB file : Tito_5F33.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5F33-query.scw
PDB file : Tito_Scwrl_5F33.pdb: