Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIIGYARTTINDVDLTTQVDQLSDFGCQ--EIFHETYEVEQNDSTAVHLESVIADMQQGDALVICQLHRLGKSTRQLTELTQLFKDRGLHLISLDEGIDTR-EMGKIYFQLMENLANMECALIKERTLVGLDEARKKGKIGGRPKIDAKTIKKIR-RLYYEKKETIQFISSKCGVSVGTCYKYINLPEKEIEQLCI
1GDT Chain:A ((1-183))MRLFGYARVSTSQQSLDIQVRALKDAGVKANRIFTDKASGSS-S-DRKGLDLLRMKVEEGDVILVKKLDRLGRDTADMIQLIKEFDAQGVSIRFIDDGISTDGEMGKMVVTILSAVAQAERQRILERTNEGRQEAMAKGVVFGRKRKIDRD---AVLN-MWQQGLGASHISKTMNIARSTVYKVINESN--------


General information:
TITO was launched using:
RESULT:

Template: 1GDT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 627 -299 -0.48 -1.67
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -0.48
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.448

(partial model without unconserved sides chains):
PDB file : Tito_1GDT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1GDT-query.scw
PDB file : Tito_Scwrl_1GDT.pdb: