Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAVKIQTSAGTIEITNDVIATVVGGAATDVFGVVGMASKNQIKDNITEILRKENYSRGVVVRQEDNGIAVDVYTIISYGTKISEVSRNVQEKVKYNLEALLGVTANSVNVFVQGVRVLPD
3BYR Chain:A ((33-85))----------------------------------------------------------LKTRRAGPRSFLEFHLVVRGDTPVEE-AHRLCDELERALAQAFPG-L-QATIHVEP------


General information:
TITO was launched using:
RESULT:

Template: 3BYR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 136 -22213 -163.33 -419.11
target 2D structure prediction score : 0.75
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -163.33
2D Compatibility (Sec. Struct. Predict.) : 0.75
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.643

(partial model without unconserved sides chains):
PDB file : Tito_3BYR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3BYR-query.scw
PDB file : Tito_Scwrl_3BYR.pdb: