Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MSNSHHATESLSQDKKHAGKVGKMKLKQLPLEYQKAIPVLKKLENAGYEAYFVGGSVRDILLNQPIHDVDIATSA----FPEEIKQLFPKTIDIGIEH----GTVLVLENDEQYEITTFRTESTYQDYRRPDHVEFVRSLSEDLKRRDFTINAFALKED----GEIIDLFDGLQDLEEQILRAVGNPHERFHEDALRMMRGLRFVSQLGFKLEEETFYAIKENHELLGKISVERINVEFIKMLLGNERAAGIHAFIETECYICCPGLKEEGEALLRLLNYHPSH 3H39 Chain:B ((37-205)) -------------------------------------------------VYVVGGFVRDLLLGIKNLDIDIVVEGNALEFAEYAKRFLPGKL---VKHDKFMTASLFLKGGLRIDIATARLE--------------MSTIKKDLYRRDFTINAMAIKLNPKDFGLLIDFFGGYRDLKEGVIRVLHTLS--FVDDPTRILRAIRFEQRFDFRIEETTERLLKQAVE-----------------------------------------------------------

General information: TITO was launched using: RESULT: Template: 3H39.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 619 4777 7.72 32.94 target 2D structure prediction score : 0.60 Monomeric hydrophicity matching model chain B : 0.68 3D Compatibility (PKB) : 7.72 2D Compatibility (Sec. Struct. Predict.) : 0.60 1D Compatibility (Hydrophobicity) : 0.68 QMean score : 0.438

(partial model without unconserved sides chains): PDB file : Tito_3H39.pdb: (Unconserved sides chains are recalculated) : Sequence: align-3H39-query.scw PDB file : Tito_Scwrl_3H39.pdb: