Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFDFFTKSFILSIIDNKNVLEEALTMNVKIFSKNNCMQCKMVKRFLTENQIAFEEVNIDEQPEAVDWLKAQGFQSVPVITSDAETVIGFRPDQLRKLAS
4K8M Chain:A ((2-72))---------------------------VTVYTKPACVQCSATSKALDKQGIAYQKVDISLDSEARDYVMALGYLQAPVVVAGNDHWSGFRPDRIKALA-


General information:
TITO was launched using:
RESULT:

Template: 4K8M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 283 -47300 -167.14 -666.19
target 2D structure prediction score : 0.77
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -167.14
2D Compatibility (Sec. Struct. Predict.) : 0.77
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.783

(partial model without unconserved sides chains):
PDB file : Tito_4K8M.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4K8M-query.scw
PDB file : Tito_Scwrl_4K8M.pdb: