Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MKKKQKQKLLNQFRPSLDGVRGQLFRSLEEESLRRYGLPLQVMLDPKNRQILTIGLAGKTNEDTRINVPIDDNFNTVLKRIRSGENGIFERFRDNLLIEIVSYWNDQRLKNDEPTAQAVATPVTEETVSVPEEKTEKPKADTTENTRSTDTNAALSFADFSKAVAEYPKFYTEQNEHEVVINEKNADEPRKLATISMTTENEFVIEKALERKYKVKL---TLIPLIEQFAATAITDR 2NWI Chain:A ((1-160)) LNAIHRILMTTD-------------GSITAIIEAVTQKKVEVETLEQKIIRAD------RELAELLEIDEGDEVNYRVVYLRANG-----------------------------------EIYAKAISFTPLKRLENSFREDLMRA--------------DIPIGKIMRKHNIEARREIRWSRVEEADLALAKELGIADR------RVISRNYNIIHRGKVLINITEFFPMERF---

General information: TITO was launched using: RESULT: Template: 2NWI.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 702 -9030 -12.86 -57.52 target 2D structure prediction score : 0.39 Monomeric hydrophicity matching model chain A : 0.60 3D Compatibility (PKB) : -12.86 2D Compatibility (Sec. Struct. Predict.) : 0.39 1D Compatibility (Hydrophobicity) : 0.60 QMean score : 0.058

(partial model without unconserved sides chains): PDB file : Tito_2NWI.pdb: (Unconserved sides chains are recalculated) : Sequence: align-2NWI-query.scw PDB file : Tito_Scwrl_2NWI.pdb: