Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSDNQLLEVQNLHTGFRLKDDYYDAVDDVSFTLDKNEILAIVGESGCGKSTLATTIMGLLDPNNTKITGEILYNDLNLIDLNETLYNKIRGNDIGMIFQDPLSALNPLMRIEDQIKEGL--SYHTKMNAEQRQARALELLEQVGIPNPARVGRQYPHELSGGMRQRVIIAIAIACKPPIVIADEPTTALDVTIQAQILDLLKDLQEETKTGIILITHDLGVVAEMADRVAVMYGGQFVEVAGVKELFDHPKHPYTRSLLNSIPQEGNHDAELHVIEGVVPSLKNMPRKGCRFAPRIPWIPASDHEEEPILHEVAPNHLVRCSCYKHFHFRDEKGEV
3TIF Chain:B ((1-222))-----MVKLKNVTKTYKMGEEIIYALKNVNLNIKEGEFVSIMGPSGSGKSTM-LNIIGCLDK---PTEGEVYIDNIKTNDLDDDELTKIRRDKIGFVFQQ--FNLIPLLTALENVELPLIFKYRGAMSGEERRKRALECLKMAELEE--RFANHKPNQLSGGQQQRVAIARALANNPPIILADQPTWALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDIN-VARFGERIIYLKDGE----------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3TIF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1141 -48890 -42.85 -222.23
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain B : 0.75

3D Compatibility (PKB) : -42.85
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.521

(partial model without unconserved sides chains):
PDB file : Tito_3TIF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TIF-query.scw
PDB file : Tito_Scwrl_3TIF.pdb: