Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVKLNVTLLRFMEDEDFRVLTALEMAMRNHDVAPTALVERIAQLPHGGCRKRLNNLLKHKMIHHENTMYDGYAMKYGAYDYLALRTLSKRGTCTGVGHRIGCGKESDIILVRDE-AGHEC--VLKLQRLGRCSFRSVARNRDYKGN-GRA-RHGESWFYLSRLASQKEYSFMKLLYDEGFPVPKPIDQNRHALLMELVPGTLLNNITEL--------GDASKVYRRALELMVKL-AESGLIHGDFNEFNLMITDDQRVIMIDFPQMISINHPNASELFDRDVQNLANFFHRRFKVDTTWFPSLEKDVVRKGELDKQVYASGHFTRKQQEDLERLMLEGFQRSEKSDDEAGSQVRDSDASDDDGDENASQRSDIGNADVDAGVAGKFTSIPGGARGGESDEEREDSSDDDASEGRLLDEAMGAARERREGEIYARNTDRNANFLPDGKINEDHVKHQIRKNIRRKDNHDFNRHLHRNVQKGRQKQKIQRQLKSSNGGGFFD
4JIN Chain:A ((37-253))---------------------------------------------------------------------------------KTLYKLSAKGYITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKM---DEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEAGVSVPQPYTYMKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMYI--DKVYFIDMGQAVTLRHPMAESYLERDVRNIIRFFSK-YGVKADFEEMLK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4JIN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 979 -1814 -1.85 -8.94
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -1.85
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.380

(partial model without unconserved sides chains):
PDB file : Tito_4JIN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4JIN-query.scw
PDB file : Tito_Scwrl_4JIN.pdb: