Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKFKKMLTLAAIGLSGFGLVACGNQSAASKQSASGTIEVISRENGSGTRGAFTEITGILKKDGDKKIDNTAKTAVIQNSTEGVLSAVQGNANAIGYISLGSLTKSVKALEIDGVKASRDTVLDGEYPLQRPFNIVWSSNLSKLGQDFISFIHSKQGQQVVTDNKFIEAKTETTEYTSQHLSGKLSVVGSTSVSSLMEKLAEAYKKENPEVTIDITSNGSSAGITAVKEKTADIGMVSRELTPEE--GKSLTHDAIALDGIAVVVNNDN-KAS--QVSMAELADVFSGKLTTWDKIK
1IXH Chain:A ((2-114))-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASLTGAGATFPAPVYAKWADTYQK-ETGNKVNYQGIGSSGGVKQIIANTVDFGASDAPLSDEKLAQEGLFQFPTVIGGVVLAVNIPGLKSGELVLDGKTLGDIYLGKIKKWDDE-


General information:
TITO was launched using:
RESULT:

Template: 1IXH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 311 -15656 -50.34 -144.96
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -50.34
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.418

(partial model without unconserved sides chains):
PDB file : Tito_1IXH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1IXH-query.scw
PDB file : Tito_Scwrl_1IXH.pdb: