Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNLAAFEAFVKVMETGSISVAADQLFITQPAVTKRIHSLEEYFGVKLFESAGRGVQATHAAHSLLPKVKSWLNELRDIHHTLSHEQTQIQGRLKIGTSHHIGLHHLPAPLKHFVQQFPQVTLDVHFVDSEQAHEQVLAGDLELAFLTLPPSGDERLNYITIWN-DPLVFVAAPFHPLAQKKNLILQDLIEYPSLLPAAQTYTAQITLAEFEKQCLKPKITMSNNPLESIRMLVSIGLGWSVLPKTLLN------QDMQQLDLN-VEMNRQLGMVWHPARTQSRAMQELIKMMQE
3FZV Chain:D ((4-295))YTLRQLKYFVTTVEC---AEASRKLYIAQPSISTAV--LEESF-------------LTPAGARFYRKAQELLRMAHEFEQ-----NDVIAGQIDIGCFETVAPLYLPGLIAGFRQAYPGVEIRIRDGEQQELVQGLTSGRFDLAFLYEH-DLDSTIETEPLMPPQRPHALLPEGHRFAGQAQVSLRDLCLEPMILLDVQ-PSRTYFVSLFEELGLTPNIAFSSPSIEMVRGMVGQGFGFSLLVTRPHSECTYDGKKVVMVDLAEPVSTSGLAAAWLKRAQLTKPARLFVDYCR-


General information:
TITO was launched using:
RESULT:

Template: 3FZV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1107 -91679 -82.82 -352.61
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain D : 0.73

3D Compatibility (PKB) : -82.82
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.577

(partial model without unconserved sides chains):
PDB file : Tito_3FZV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3FZV-query.scw
PDB file : Tito_Scwrl_3FZV.pdb: