Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSFSRKQFALSAIFVAILATGGSFMLLHENADAKAAPTAAQQAATVDVAPVVSKTITDWQEYSGRLEAIDQVDIRPQVSGKLIAVHFKDGSLVKKGDLLFTIDPRPFEAELNRAKAQLASAEAQVTYTASNLSRIQRLIQSNAVSRQELDLAENDARSANANLQAARAAVQSARLNLEYTRITAPVSGRISRAEVTVGNVVSAGNGAQVLTSLVSVSRLYASFDVDE-QTYLKYISNQRNSSQV--------PVYMGLANETGFTREGTINSIDNNLNTTSGTIRVRATFDNPNGVLLPGLYARIRLGGGQPRPAILISPTAVGVDQDKRFVVVVDAKNQTAYREVKLGAQQDGLQIVNSGLQAGDRIVVNGLQRIRPGDPVTPHLVPMPNSQITANATPQPQPTDKTSTPAKG
1T5E Chain:K ((29-259))-----------------------------------------------------------TELPGRTNAFRIAEVRPQVNGIILKRLFKEGSDVKAGQQLYQIDPATYEADYQSAQANLASTQEQA-------QRYKLLVADQAVSKQQY-------ADANAAYLQSKAAVEQARINLRYTKVLSPISGRIGRSAVTEGALVTNGQ-ANAMATVQQLDPIY--VDVTQPSTALLRLRRELASGQLERAGDNAAKVSLKLEDGSQYPLEGRLEFSEVSVDEGTGSVTIRAVFPNPNNELLPGMFVHAQL-----------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1T5E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain K - contact count / total energy / energy per contact / energy per residue : 875 -33607 -38.41 -151.38
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain K : 0.68

3D Compatibility (PKB) : -38.41
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.603

(partial model without unconserved sides chains):
PDB file : Tito_1T5E.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1T5E-query.scw
PDB file : Tito_Scwrl_1T5E.pdb: