Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKIFSTNTCPVPNDLESVIHHKDEVPAELCGMSEQQVQKIWKSIESLYKTGNYPLITFCLRRQGKILLNRSIGYAQGNSPAGLQENALIATPDTPVCLFSASKMITAMLIHLLDEKGEINLLDPVSYYIPEYGVNGKRRATIFHLLSHRGGIPYVDGDVTPELLFDKDEILRRLYAARPVSPAGNHLAYHAVTAGY-ILGEIIERVTGQDLRKFVHETIEKPMDMPYFNYGLKPEYRAEVALNCATGLHPRLG-TDHYLNHVLGGGLQLAVDVTNDSRFMDTICPAGNIYTSAEQAGRFFEMLLSGGSYQGKQILSEKTIFRATLPTTGVNIDRTLLIPMRYALGPMLGSNPVGLFGPMTGQAFGHLGFSNILCWADPERDISVSLLTTGKSVVGTHLPALANLLYQISIQCPRIPRDQRRSLFGSDSHETDLV
5GKV Chain:A ((14-385))--------------------------TDITGVCPDRFAAVREVFEQNFADGGELGARFAFAIEGEVVVDLMGGFADRKR-------QVPFGPDTLTALFSTTKAVAALLIARLVDEGRLAYDQAVADVWPEFAQAGKDAVTVEQALSHQAGLSGFPDETDPAIWFDWDATCAKLAAMAPLFPIGSASGYHPVTY-GYLAGEIFRRVDGRTMGTALREDICEPLGLDLWIGLPDSE-HDRVADLMRPTAMPQFGEINPAVEAAFFKPWSS-P--KGAAEWRRVEIPSANGHATAPALARLMGALAHGGTLDGRSLITPAGIKAATAERLRGRD-LVLPYEISWGAGFMRNEPNF--YYGPTAEAFGHSGWGGSCAFADPTRGVSGAYVMNKQGNALIGDPRSVRLIEAAYAS-----------------------


General information:
TITO was launched using:
RESULT:

Template: 5GKV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2365 -155949 -65.94 -423.77
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -65.94
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.535

(partial model without unconserved sides chains):
PDB file : Tito_5GKV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5GKV-query.scw
PDB file : Tito_Scwrl_5GKV.pdb: